Open AccessDecomposing complex traits through crop modelling to support cultivar recommendation. A proof of concept with a focus on phenology and field pea
Author(s) -
Livia Paleari,
Ermes Movedi,
Fosco M. Vesely,
Matteo Tettamanti,
Daniele Piva,
Roberto Confalonieri
Publication year - 2022
Publication title -
italian journal of agronomy
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.509
H-Index - 24
eISSN - 2039-6805
pISSN - 1125-4718
DOI - 10.4081/ija.2022.1998
Subject(s) - ideotype , cultivar , phenology , context (archaeology) , sowing , trait , biology , growing degree day , germplasm , agronomy , sativum , crop , field pea , computer science , paleontology , programming language
Cultivar recommendation is crucial for achieving high and stable yields, and it can be successfully supported by crop models because of their capability of exploring genotype × environment × management interactions. Different modelling approaches have been developed to this end, mostly relying on dedicated field trials to characterize the germplasm of interest. Here, we show how even data routinely collected in operational contexts can be used for model-based cultivar recommendation, with a case study on phenological traits and field pea (Pisum sativum L.). Eight hundred and four datasets including days from sowing to plant emergence, first flower, and maturity were collected in Northern Italy from 2017 to 2020 and they were used to optimize six parameters (base, optimum, and maximum temperature for development, growing degree days to reach emergence, flowering and maturity) of the crop model WOFOST-GT2 for 13 cultivars. This allowed obtaining the phenotypic profiles for these cultivars at functional traits level, without the need of carrying out dedicated phenotypizations. Sensitivity analysis (SA) techniques (E-FAST) and the statistical distributions of the optimized parameters were used to design pea ideotypes able to maximize yields and yield stability in 24 agro-climatic contexts (three soil conditions × two sowing times × four agro-climatic classes). For each of these contexts, the 13 cultivars were ranked according to their similarity to the ideotype based on the weighted Euclidean distance. Results of SA identified growing degree days to reach flowering as the trait mainly affecting crop productivity, although cardinal temperatures also played a role, especially in case of early sowings. This reflected in the ideotypes and, therefore, in cultivar ranking, leading to recommend a panel of cultivars characterized by low base temperature and high thermal requirements to reach flowering. Despite the limits of the study, which is focused only on phenological traits, it represents an extension of available approaches for model-aided cultivar recommendation, given the methodology we propose is able to take full advantage of the potentialities of crop models without requiring dedicated experiments aimed at profiling the germplasm of interest at the level of functional traits.