Open Access
Learning (from) the Electron Density: Transferability, Conformational and Chemical Diversity
Author(s) -
Alberto Fabrizio,
Ksenia R. Briling,
Andrea Grisafi,
Clémence Corminbœuf
Publication year - 2020
Publication title -
chimia
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.387
H-Index - 55
eISSN - 2673-2424
pISSN - 0009-4293
DOI - 10.2533/chimia.2020.232
Subject(s) - transferability , density functional theory , electron density , gaussian , gaussian process , scaling , statistical physics , covariance , computer science , scalability , computational chemistry , artificial intelligence , machine learning , chemistry , physics , electron , mathematics , quantum mechanics , statistics , geometry , logit , database
Machine-learning in quantum chemistry is currently booming, with reported applications spanning all molecular properties from simple atomization energies to complex mathematical objects such as the many-body wavefunction. Due to its central role in density functional theory, the electron density is a particularly compelling target for non-linear regression. Nevertheless, the scalability and the transferability of the existing machine-learning models of ?(r) are limited by its complex rotational symmetries. Recently, in collaboration with Ceriotti and coworkers, we combined an efficient electron density decomposition scheme with a local regression framework based on symmetry-adapted Gaussian process regression able to accurately describe the covariance of the electron density spherical tensor components. The learning exercise is performed on local environments, allowing high transferability and linear-scaling of the prediction with respect to the number of atoms. Here, we review the main characteristics of the model and show its predictive power in a series of applications. The scalability and transferability of the trained model are demonstrated through the prediction of the electron density of Ubiquitin.