Open AccessQuantitative structure-retention relationship model for predicting retention indices of constituents of essential oils of Thymus vulgaris (Lamiaceae)
Author(s) -
Youssouf Driouche,
Djelloul Messadi
Publication year - 2019
Publication title -
journal of the serbian chemical society
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.227
H-Index - 45
eISSN - 1820-7421
pISSN - 0352-5139
DOI - 10.2298/jsc180817010d
Subject(s) - kovats retention index , molecular descriptor , linear regression , chemistry , quantitative structure–activity relationship , loo , partial least squares regression , cross validation , biological system , chromatography , mathematics , statistics , stereochemistry , gas chromatography , biology
In this paper, a quantitative structure?retention relationship (QSRR) model was developed for predicting the retention indices (log RI) of 36 constituents of essential oils. First, the chemical structure of each compound was sketched using HyperChem software. Then, molecular descriptors covering different information of molecular structures were calculated by Dragon software. The results illustrated that linear techniques, such as multiple linear regression (MLR), combined with a successful variable selection procedure are capable of generating an efficient QSRR model for predicting the retention indices of different compounds. This model, with high statistical significance (R2 = 0.9781, Q2 LOO = 0.9691, Q2 ext = 0.9546, Q2 L(5)O = 0.9667, F = 245.27), could be used adequately for the prediction and description of the retention indices of other essential oil compounds. The reliability of the proposed model was further illustrated using various evaluation techniques: leave-5-out cross-validation, bootstrap, randomization test and validation through the test set.