High-throughput nanopore sequencing of Treponema pallidum tandem repeat genes arp and tp0470 reveals clade-specific patterns and recapitulates global whole genome phylogeny | Zendy

Nicole A. P. Lieberman | Zendy; Thaddeus D. Armstrong | Zendy; Benjamin I. Chung | Zendy; Daniel Pfalmer | Zendy; Christopher M. Hennelly | Zendy; Austin M. Haynes | Zendy; Emily Romeis | Zendy; Qianqiu Wang | Zendy; Ruili Zhang | Zendy; Caixia Kou | Zendy; Giulia Ciccarese | Zendy; Ivano Dal Conte | Zendy; Marco Cusini | Zendy; Filippo Drago | Zendy; Shuichi Nakayama | Zendy; Kenichi Lee | Zendy; Makoto Ohnishi | Zendy; Kelika A. Konda | Zendy; Silver K. Vargas | Zendy; María Eguiluz | Zendy; Carlos F. Cacéres | Zendy; Jeffrey D. Klausner | Zendy; Natàlia Casamitjana | Zendy; Anne Rompalo | Zendy; Fiona Mulcahy | Zendy; Edward W. Hook | Zendy; Irving Hoffman | Zendy; Mitch Matoga | Zendy; Heping Zheng | Zendy; Bin Yang | Zendy; Eduardo López-Medina | Zendy; Lady G. Ramirez | Zendy; Justin D. Radolf | Zendy; Kelly L. Hawley | Zendy; Juan C. Salazar | Zendy; Sheila A. Lukehart | Zendy; Arlene C. Seña | Zendy; Jonathan B. Parr | Zendy; Lorenzo Giacani | Zendy; Alexander L. Greninger | Zendy

Open Access

High-throughput nanopore sequencing of Treponema pallidum tandem repeat genes arp and tp0470 reveals clade-specific patterns and recapitulates global whole genome phylogeny

Author(s) -

Nicole A. P. Lieberman,

Thaddeus D. Armstrong,

Benjamin I. Chung,

Daniel Pfalmer,

Christopher M. Hennelly,

Austin M. Haynes,

Emily Romeis,

Qianqiu Wang,

Ruili Zhang,

Caixia Kou,

Giulia Ciccarese,

Ivano Dal Conte,

Marco Cusini,

Filippo Drago,

Shuichi Nakayama,

Kenichi Lee,

Makoto Ohnishi,

Kelika A. Konda,

Silver K. Vargas,

María Eguiluz,

Carlos F. Cacéres,

Jeffrey D. Klausner,

Natàlia Casamitjana,

Anne Rompalo,

Fiona Mulcahy,

Edward W. Hook,

Irving Hoffman,

Mitch Matoga,

Heping Zheng,

Bin Yang,

Eduardo López-Medina,

Lady G. Ramirez,

Justin D. Radolf,

Kelly L. Hawley,

Juan C. Salazar,

Sheila A. Lukehart,

Arlene C. Seña,

Jonathan B. Parr,

Lorenzo Giacani,

Alexander L. Greninger

Publication year - 2022

Publication title -

carolina digital repository (university of north carolina at chapel hill)

Language(s) - English

DOI - 10.17615/cxm8-pr61

Subject(s) - nanopore sequencing , biology , treponema , clade , genome , tandem repeat , phylogenetics , dna sequencing , whole genome sequencing , gene , genetics , computational biology , minion , phylogenetic tree , evolutionary biology , virology , syphilis , human immunodeficiency virus (hiv)

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