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Small Subunit rRNA Gene Comparisons of Four Actinosporean Species to Establish a Polymerase Chain Reaction Test for the Causative Agent of Proliferative Gill Disease in Channel Catfish
Author(s) -
Hanson Larry A.,
Lin Danjuan,
Pote Linda M. W.,
Shivaji Renuka
Publication year - 2001
Publication title -
journal of aquatic animal health
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.507
H-Index - 52
eISSN - 1548-8667
pISSN - 0899-7659
DOI - 10.1577/1548-8667(2001)013<0117:ssrgco>2.0.co;2
Subject(s) - catfish , biology , ictalurus , polymerase chain reaction , ribosomal rna , gene , edwardsiella ictaluri , clone (java method) , ribosomal dna , ictaluridae , genetics , microbiology and biotechnology , phylogenetics , fishery , fish <actinopterygii>
Proliferative gill disease (PGD) causes high morbidity and mortality in cultured channel catfish Ictalurus punctatus. The presence of the myxozoan Aurantiactinomyxon ictaluri (class Actinosporea) is strongly associated with PGD. This parasite, shed as an actinospore from the aquatic oligochaete Dero digitata , infects channel catfish by an undetermined route. Several other actinosporeans have been identified that are shed from D. digitata isolated from catfish ponds, including those designated A. mississippiensis, Helioactinomyxon sp., and the actinospore stage of Henneguya exilis. By the use of multiple sequence alignment of polymerase chain reaction (PCR)‐amplified small subunit ribosomal RNA (SSU rRNA) genes of A. ictaluri, A. mississippiensis , and H. exilis , we identified two variable regions. The largest variable region was PCR amplified, sequenced from the Helioactinomyxon sp., and used in addition to the other three sequences in multiple‐sequence alignment comparison to develop PCR primers specific for A. ictaluri. This PCR specific for A. ictaluri produced 104‐base‐pair products from a plasmid clone containing the SSU rRNA gene of A. ictaluri , spore DNA of A. ictaluri , and DNA prepared from channel catfish gill and D. digitata infected with A. ictaluri. The PCR assay was able to detect as few as 100 copies of the cloned gene. There was no detectable product from the genomic DNA of H. exilis, A. mississippiensis , or Helioactinomyxon sp., specific pathogen‐free channel catfish gill, and noninfected D. digitata. The PCR assay will be useful as a diagnostic tool for PGD in channel catfish and will aid in the elucidation of the life cycle of A. ictaluri.