Evolution of Antibiotic Synthesis Gene Clusters in the Streptomyces globisporus TFH56, Isolated from Tomato Flower | Zendy

Gyeongjun Cho | Zendy; YounSig Kwak | Zendy

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Evolution of Antibiotic Synthesis Gene Clusters in the Streptomyces globisporus TFH56, Isolated from Tomato Flower

Author(s) -

Gyeongjun Cho,

YounSig Kwak

Publication year - 2019

Publication title -

g3 genes genomes genetics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.468

H-Index - 66

ISSN - 2160-1836

DOI - 10.1534/g3.119.400037

Subject(s) - biology , streptomyces , gene , gene cluster , whole genome sequencing , genetics , plasmid , genome , strain (injury) , chromosome , botany , bacteria , anatomy

Streptomyces species are known to produce various bioactive metabolites that can prevent plant diseases. Previously, the Streptomyces strain TFH56 was found to inhibit the gray mold pathogen, Botrytis cinerea , in tomato flower. In this study, the genome sequence of strain TFH56 was acquired using the Pacific Biosciences RS II platform. Three linear sequences (7.67 Mbp in total) were obtained. Based on average nucleotide identity, strain TFH56 was classified as Streptomyces globisporus , which is consistent with the presence of a linear chromosome and linear plasmids. Moreover, as with other examples of S. globisporus , the genome of strain TFH56 included a caryolan-1-ol synthase gene, a conprimycin synthetic gene cluster, and a lidamycin synthetic gene cluster.

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