Open AccessProposal of Smith-Waterman algorithm on FPGA to accelerate the forward and backtracking steps
Author(s) -
Fabio Fonseca de Oliveira,
Leonardo Alves Dias,
Marcelo A. C. Fernandes
Publication year - 2022
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0254736
Subject(s) - backtracking , computer science , field programmable gate array , smith–waterman algorithm , dynamic programming , algorithm , speedup , sequence (biology) , path (computing) , multiple sequence alignment , gate array , parallel computing , sequence alignment , computer hardware , biochemistry , chemistry , genetics , biology , peptide sequence , gene , programming language