Open AccessMolecular detection of extended spectrum β-lactamase genes in Escherichia coli clinical isolates from diarrhoeic children in Kano, Nigeria
Author(s) -
Habeeb K. Saka,
Silvia García-Soto,
NT Dabo,
Vicente Lopez-Chavarrias,
Bashir Muhammad,
María UgarteRuiz,
Julio Álvarez
Publication year - 2020
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0243130
Subject(s) - microbiology and biotechnology , biology , antibiotic resistance , genotype , escherichia coli , context (archaeology) , antimicrobial , antibiotics , gene , phenotype , polymerase chain reaction , multiple drug resistance , beta lactamase , genetics , paleontology
The increase in antimicrobial resistance in developed and developing countries is a global public health challenge. In this context β-lactamase production is a major contributing factor to resistance globally. The aim of this study was to determine the prevalence of phenotypic and genotypic extended spectrum β-lactamases (ESBLs) in 296 E . coli isolates recovered from diarrhoeic children younger than five years in Kano whose susceptibility profile against 7 antimicrobials had been determined. The E . coli isolates were subjected to double disc synergy test for phenotypic ESBLs detection and ESBL associated genes ( bla CTX-M , bla TEM and bla SHV ) were detected using conventional PCR. Phenotypically, 12.8% (38/296) E . coli isolates presented a ESBLs phenotype, with a significantly higher proportion in isolates from females compared with males ( P-value = 0.024). bla CTX-M 73.3% and bla TEM 73.3% were the predominant resistance genes in the ESBLs positive E . coli (each detected in 22/30 isolates, of which 14 harboured both). In addition, 1/30 harboured bla CTX-M + bla TEM + bla SHV genes simultaneously. This study demonstrates the presence of ESBLs E . coli isolates in clinically affected children in Kano, and demonstrates the circulation of bla CTX-M and bla TEM associated with those phenotypes. Enactment of laws on prudent antibiotic use is urgently needed in Kano.