Open AccessTargeted transcriptomic study of the implication of central metabolic pathways in mannosylerythritol lipids biosynthesis in Pseudozyma antarctica T-34
Author(s) -
Keisuke Wada,
Hideaki Koike,
Tatsuya Fujii,
Tomotake Morita
Publication year - 2020
Publication title -
plos one
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.99
H-Index - 332
ISSN - 1932-6203
DOI - 10.1371/journal.pone.0227295
Subject(s) - metabolic pathway , biochemistry , biosynthesis , ustilago , metabolism , biology , transcriptome , yeast , citric acid cycle , metabolomics , metabolite , lipid metabolism , candida antarctica , gene , glycolipid , gene expression , enzyme , lipase , bioinformatics
Pseudozyma antarctica is a nonpathogenic phyllosphere yeast known as an excellent producer of industrial lipases and mannosylerythritol lipids (MELs), which are multi-functional glycolipids. The fungus produces a much higher amount of MELs from vegetable oil than from glucose, whereas its close relative, Ustilago maydis UM521, produces a lower amount of MELs from vegetable oil. In the present study, we used previous gene expression profiles measured by DNA microarray analyses after culturing on two carbon sources, glucose and soybean oil, to further characterize MEL biosynthesis in P . antarctica T-34. A total of 264 genes were found with induction ratios and expression intensities under oily conditions with similar tendencies to those of MEL cluster genes. Of these, 93 were categorized as metabolic genes using the Eukaryotic Orthologous Groups classification. Within this metabolic category, amino acids, carbohydrates, inorganic ions, and secondary metabolite metabolism, as well as energy production and conversion, but not lipid metabolism, were enriched. Furthermore, genes involved in central metabolic pathways, such as glycolysis and the tricarboxylic acid cycle, were highly induced in P . antarctica T-34 under oily conditions, whereas they were suppressed in U . maydis UM521. These results suggest that the central metabolism of P . antarctica T-34 under oily conditions contributes to its excellent oil utilization and extracellular glycolipid production.