Open AccessHAM-ART: An optimised culture-free Hi-C metagenomics pipeline for tracking antimicrobial resistance genes in complex microbial communities
Author(s) -
Lajos Kalmár,
Shefali Gupta,
Iain Kean,
Xiaoliang Ba,
Nazreen F. Hadjirin,
Elizabeth Lay,
Stefan P. W. de Vries,
Michael Bateman,
Harriet Bartlett,
Juan Hernandez-Garcia,
Alexander W. Tucker,
Olivier Restif,
Mark P. Stevens,
James Wood,
Duncan J. Maskell,
A. Grant,
Mark A. Holmes
Publication year - 2022
Publication title -
plos genetics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.587
H-Index - 233
eISSN - 1553-7404
pISSN - 1553-7390
DOI - 10.1371/journal.pgen.1009776
Subject(s) - extrachromosomal dna , metagenomics , biology , plasmid , microbiome , antibiotic resistance , computational biology , resistome , gene , antimicrobial , genetics , genome , microbiology and biotechnology , bacteria , integron