Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing | Zendy

Jennifer K. Spinler | Zendy; Sabeen Raza | Zendy; Jessica K. Runge | Zendy; Ruth Ann Luna | Zendy

Open Access

Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing

Author(s) -

Jennifer K. Spinler,

Sabeen Raza,

Jessica K. Runge,

Ruth Ann Luna

Publication year - 2019

Publication title -

microbiology resource announcements

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.383

H-Index - 35

ISSN - 2576-098X

DOI - 10.1128/mra.00903-19

Subject(s) - nanopore sequencing , cystic fibrosis , whole genome sequencing , pseudomonas aeruginosa , lineage (genetic) , biology , genetics , strain (injury) , dna sequencing , sequence (biology) , nanopore , genome , microbiology and biotechnology , gene , bacteria , anatomy , materials science , nanotechnology

Hybrid de novo assembly of Illumina/Nanopore sequence data produced complete circular sequences of the chromosome and a plasmid for the multidrug-resistant Pseudomonas aeruginosa Houston-1 strain. This provides a high-quality representative sequence for a lineage endemic to a pediatric cystic fibrosis care center at Texas Children's Hospital.

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