Open AccessComplete Genome Sequence of a Tomato Brown Rugose Fruit Virus Isolated in the United States
Author(s) -
Bidisha Chanda,
Yazmín Rivera,
Schyler O. Nunziata,
Marco Galvez,
Andrea Gilliard,
KaiShu Ling
Publication year - 2020
Publication title -
microbiology resource announcements
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.383
H-Index - 35
ISSN - 2576-098X
DOI - 10.1128/mra.00630-20
Subject(s) - biology , minion , phylogenetic tree , genome , whole genome sequencing , genetics , sequence (biology) , virus , gene , nanopore sequencing
The complete genome sequence of a U.S. isolate of aTomato brown rugose fruit virus (ToBRFV) (CA18-01) was obtained through Illumina and MinION sequencing. The U.S. ToBRFV isolate shared a high nucleic acid sequence identity (>99%) with known ToBRFV isolates. Phylogenetic analysis revealed a tight cluster for ToBRFV isolates throughout the world, suggesting a short evolutionary history.