Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing | Zendy

Kayzad Nilgiriwala | Zendy; Ayan Mandal | Zendy; Grishma Patel | Zendy; Tejal Mestry | Zendy; Smriti Vaswani | Zendy; Ambreen Shaikh | Zendy; Kalpana Sriraman | Zendy; Swapneil Parikh | Zendy; Shreevatsa Udupa | Zendy; Nirjhar Chatterjee | Zendy; Jayanthi Shastri | Zendy; Nerges Mistry | Zendy

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Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing

Author(s) -

Kayzad Nilgiriwala,

Ayan Mandal,

Grishma Patel,

Tejal Mestry,

Smriti Vaswani,

Ambreen Shaikh,

Kalpana Sriraman,

Swapneil Parikh,

Shreevatsa Udupa,

Nirjhar Chatterjee,

Jayanthi Shastri,

Nerges Mistry

Publication year - 2021

Publication title -

microbiology resource announcements

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.383

H-Index - 35

ISSN - 2576-098X

DOI - 10.1128/mra.00231-21

Subject(s) - nanopore sequencing , genome , covid-19 , biology , genetics , dna sequencing , rna , virology , nanopore , whole genome sequencing , genomics , gene , computational biology , medicine , infectious disease (medical specialty) , outbreak , disease , materials science , pathology , nanotechnology

We report here the genome sequences of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from five coronavirus disease 2019 (COVID-19) patients in Mumbai, India. Viral genomic RNA was isolated from nasopharyngeal swabs and/or respiratory particles from the masks of the patients. Genomic variant analysis determined 8 to 22 mutations, and the variants belong to lineages previously associated with Indian variants.

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