16S rRNA Amplicon Sequencing of Urban Prokaryotic Communities in the South Bronx River Estuary | Zendy

Eugênia NaroMaciel | Zendy; Melissa R. Ingala | Zendy; Irena E. Werner | Zendy; Allison Fitzgerald | Zendy

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16S rRNA Amplicon Sequencing of Urban Prokaryotic Communities in the South Bronx River Estuary

Author(s) -

Eugênia NaroMaciel,

Melissa R. Ingala,

Irena E. Werner,

Allison Fitzgerald

Publication year - 2020

Publication title -

microbiology resource announcements

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.383

H-Index - 35

ISSN - 2576-098X

DOI - 10.1128/mra.00182-20

Subject(s) - amplicon , amplicon sequencing , 16s ribosomal rna , estuary , biodiversity , phylum , biology , proteobacteria , geography , ecology , gene , polymerase chain reaction , genetics

Biodiversity monitoring is an essential component of restoration efforts. We sequenced 16S rRNA gene amplicons from sediments and waters of Hunts Point Riverside Park and Soundview Park, located in a historically degraded but recovering urban estuary in New York. In total, 16,165 unique amplicon sequence variants were recovered, and Proteobacteria was the dominant phylum.

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