Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria
Author(s) -
Temitope O. C. Faleye,
Ifeorah Ijeoma,
Oluseyi A. Olayinka,
Bolaji Bosede Oluremi,
Uwem E. George,
O. A. Arowolo,
Ewean Chukwuma Omoruyi,
Emmanuel Donbraye,
A. O. Oyero,
Moses Olubusuyi Adewumi,
Johnson Adekunle Adeniji
Publication year - 2020
Publication title -
microbiology resource announcements
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.383
H-Index - 35
ISSN - 2576-098X
DOI - 10.1128/mra.00094-20
Subject(s) - orfs , open reading frame , upstream open reading frame , whole genome sequencing , genetics , biology , genome , nucleic acid sequence , reading (process) , complete sequence , peptide sequence , gene , linguistics , philosophy
Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are in different reading frames, with the uORF in a +1 reading frame relative to the ppORF.
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