Highly Sensitive Method for Amplification of Human Immunodeficiency Virus Type 2 DNA
Author(s) -
Florence Damond,
Ibtissam Loussert-Ajaka,
Cristian Apetrei,
Diane Descamps,
Sandrine Souquière,
A. Leprêtre,
Sophie Matheron,
Françoise BrunVézinet,
François Simon
Publication year - 1998
Publication title -
journal of clinical microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.349
H-Index - 255
eISSN - 1070-633X
pISSN - 0095-1137
DOI - 10.1128/jcm.36.3.809-811.1998
Subject(s) - primer (cosmetics) , biology , virology , nested polymerase chain reaction , polymerase chain reaction , microbiology and biotechnology , long terminal repeat , dna , peripheral blood mononuclear cell , virus , primer dimer , genome , provirus , gene , genetics , chemistry , multiplex polymerase chain reaction , organic chemistry , in vitro
We evaluated a new human immunodeficiency virus type 2 (HIV-2) DNA amplification strategy based on peripheral blood mononuclear cell long PCR (XL PCR) followed by nested PCR amplification. The primers used were located in the highly conserved long terminal repeat and in thepol regions of the genome. Five primer pairs corresponding to different regions of the HIV-2env gene were used in the nested step. Samples from 42 patients were tested, which yielded positive amplification with at least two primer pairs in 40 (95%) samples. A primer pair (EB2/EB5) located on the V3 region succeeded in amplifying proviral DNA in 40 samples.
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