Sequencing, De Novo Assembly, and Annotation of the Complete Genome of a New Thraustochytrid Species, Strain CCAP_4062/3 | Zendy

Khawla Seddiki | Zendy; François Godart | Zendy; Riccardo Aiese Cigliano | Zendy; Walter Sanseverino | Zendy; Mohamed Barakat | Zendy; Philippe Ortet | Zendy; Fabrice Rébeillé | Zendy; Éric Maréchal | Zendy; Olivier Cagnac | Zendy; Alberto Amato | Zendy

Open Access

Sequencing, De Novo Assembly, and Annotation of the Complete Genome of a New Thraustochytrid Species, Strain CCAP_4062/3

Author(s) -

Khawla Seddiki,

François Godart,

Riccardo Aiese Cigliano,

Walter Sanseverino,

Mohamed Barakat,

Philippe Ortet,

Fabrice Rébeillé,

Éric Maréchal,

Olivier Cagnac,

Alberto Amato

Publication year - 2018

Publication title -

genome announcements

Language(s) - English

Resource type - Journals

ISSN - 2169-8287

DOI - 10.1128/genomea.01335-17

Subject(s) - strain (injury) , biology , genome , sequence assembly , annotation , whole genome sequencing , gc content , gene , coding region , genetics , computational biology , anatomy , transcriptome , gene expression

Thraustochytrids are ecologically and biotechnologically relevant marine species. We report here the de novo assembly and annotation of the whole-genome sequence of a new thraustochytrid strain, CCAP_4062/3. The genome size was estimated at 38.7 Mb with 11,853 predicted coding sequences, and the GC content was scored at 57%.

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