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Genome Sequences of a Novel Recombinant Duck Circovirus in China
Author(s) -
Wenchao Sun,
Min Zheng,
Huihui Cao,
Huijun Lu,
Xiankai Wei,
Yi Pan,
Hongyun Zhang,
Su JiaoXiu,
Jun Li,
Ningyi Jin
Publication year - 2016
Publication title -
genome announcements
Language(s) - English
Resource type - Journals
ISSN - 2169-8287
DOI - 10.1128/genomea.01181-16
Subject(s) - biology , genome , circovirus , recombinant dna , genetics , gene , genotype , porcine circovirus , virology , virus
In this study, YN26/2013, a novel recombinant duck circovirus (DuCV), was isolated from a Muscovy duck in Yunnan Province, southern China. The whole genome of YN26/2013 consists of 1,987 nucleotides (nt), the same genomic size as that of the DuCV-2 genotype. However, YN26/2013 shares 91.5 to 94.3% nucleotide identity similarity with previously reported type I (DuCV-1) viruses. Importantly, a novel putative recombinant event between DuCV-1 and DuCV-2 was identified as occurring within the 987- to 1111-nt region of the YN26/2013 genome.

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