Isolation of a Complete Circular Virus Genome Sequence from an Alaskan Black-Capped Chickadee ( Poecile atricapillus ) Gastrointestinal Tract Sample | Zendy

Zachary R. Hanna | Zendy; Charles Runckel | Zendy; Jérôme Fuchs | Zendy; Joseph L. DeRisi | Zendy; David P. Mindell | Zendy; Caroline Van Hemert | Zendy; Colleen M. Handel | Zendy; John P. Dumbacher | Zendy

Open Access

Isolation of a Complete Circular Virus Genome Sequence from an Alaskan Black-Capped Chickadee ( Poecile atricapillus ) Gastrointestinal Tract Sample

Author(s) -

Zachary R. Hanna,

Charles Runckel,

Jérôme Fuchs,

Joseph L. DeRisi,

David P. Mindell,

Caroline Van Hemert,

Colleen M. Handel,

John P. Dumbacher

Publication year - 2015

Publication title -

genome announcements

Language(s) - English

Resource type - Journals

ISSN - 2169-8287

DOI - 10.1128/genomea.01081-15

Subject(s) - biology , gastrointestinal tract , isolation (microbiology) , sample (material) , whole genome sequencing , zoology , evolutionary biology , genome , genetics , gene , bioinformatics , chemistry , chromatography , biochemistry

We report here the genome sequence of a circular virus isolated from samples of an Alaskan black-capped chickadee (Poecile atricapillus) gastrointestinal tract. The genome is 2,152 bp in length and is most similar (30 to 44.5% amino acid identity) to the genome sequences of other single-stranded DNA (ssDNA) circular viruses belonging to the gemycircularvirus group.

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