Open AccessDe Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
Author(s) -
Yeonhwa Jo,
Hoseong Choi,
Ju-Yeon Yoon,
SeungKook Choi,
Won Kyong Cho
Publication year - 2015
Publication title -
genome announcements
Language(s) - English
Resource type - Journals
ISSN - 2169-8287
DOI - 10.1128/genomea.00496-15
Subject(s) - biology , transcriptome , sequence assembly , genome , genetics , computational biology , gene , gene expression
Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.
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