Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia | Zendy

David H. Huber | Zendy; Ifeoma R. Ugwuanyi | Zendy; Sridhar A. Malkaram | Zendy; Natalia A. Montenegro-Garcia | Zendy; Vadesse Lhilhi Noundou | Zendy; Jesus E. Chavarria-Palma | Zendy

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Metagenome Sequences of Sediment from a Recovering Industrialized Appalachian River in West Virginia

Author(s) -

David H. Huber,

Ifeoma R. Ugwuanyi,

Sridhar A. Malkaram,

Natalia A. Montenegro-Garcia,

Vadesse Lhilhi Noundou,

Jesus E. Chavarria-Palma

Publication year - 2018

Publication title -

genome announcements

Language(s) - English

Resource type - Journals

ISSN - 2169-8287

DOI - 10.1128/genomea.00350-18

Subject(s) - firmicutes , west virginia , sediment , watershed , chloroflexi (class) , metagenomics , actinobacteria , proteobacteria , pennsylvanian , ecology , geology , environmental science , geography , biology , archaeology , paleontology , structural basin , 16s ribosomal rna , biochemistry , machine learning , bacteria , computer science , gene

We sequenced two metagenomes from upper sediment layers (0 to 5 and 6 to 10 cm) from the Kanawha River, West Virginia. The watershed includes inputs from the forested Appalachian Mountains, surface coal mining, municipal residues, and extensive chemical manufacturing. The dominant bacterial phyla were Proteobacteria , Bacteriodetes , Firmicutes , Actinobacteria , and Chloroflexi Xenobiotic degradation pathways were present.

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