Analysis of an RNA-seq Strand-Specific Library from an East Timorese Cucumber Sample Reveals a Complete Cucurbit aphid-borne yellows virus Genome | Zendy

Solomon Maina | Zendy; Owain R. Edwards | Zendy; Luís de Almeida | Zendy; Abel Ximenes | Zendy; Richard A. Jones | Zendy

Open Access

Analysis of an RNA-seq Strand-Specific Library from an East Timorese Cucumber Sample Reveals a Complete Cucurbit aphid-borne yellows virus Genome

Author(s) -

Solomon Maina,

Owain R. Edwards,

Luís de Almeida,

Abel Ximenes,

Richard A. Jones

Publication year - 2017

Publication title -

genome announcements

Language(s) - English

Resource type - Journals

ISSN - 2169-8287

DOI - 10.1128/genomea.00320-17

Subject(s) - biology , genome , aphid , virology , rna , virus , genetics , nucleic acid , plant virus , gene , botany

Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of Cucurbit aphid-borne yellows virus (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembled the genome of the South Korean isolate HD118.

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