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Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain from Vietnam, HUA-14PED96, with a Large Genomic Deletion
Author(s) -
SeEun Choe,
Kee-Hwan Park,
Seong-In Lim,
Van Phan Le,
Nguyen Ba Hien,
Phạm Ngọc Thạch,
Le Huynh Thanh Phuong,
Byung-Hyun An,
Song Han,
InSoo Cho,
Dong-Jun An
Publication year - 2016
Publication title -
genome announcements
Language(s) - English
Resource type - Journals
ISSN - 2169-8287
DOI - 10.1128/genomea.00002-16
Subject(s) - diarrhea , biology , porcine epidemic diarrhea virus , virology , strain (injury) , virulence , vietnamese , open reading frame , whole genome sequencing , genome , virus , gene , genetics , medicine , peptide sequence , linguistics , philosophy , anatomy
A highly virulent strain of Porcine epidemic diarrhea virus (PEDV) causing severe diarrhea has recently emerged in Vietnam. Genomic sequences from a novel strain, HUA-14PED96, isolated from a Vietnamese piglet with serious diarrhea show relatively high identity with U.S.-like PEDV strains, and have a 72-nt deletion in the open reading frame 1a (ORF1a) gene.

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