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Probing the pore of the auditory hair cell mechanotransducer channel in turtle
Author(s) -
Farris H. E.,
LeBlanc C. L.,
Goswami J.,
Ricci A. J.
Publication year - 2004
Publication title -
the journal of physiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.802
H-Index - 240
eISSN - 1469-7793
pISSN - 0022-3751
DOI - 10.1113/jphysiol.2004.061267
Subject(s) - chemistry , biophysics , permeation , ion channel , hair cell , membrane , inner ear , receptor , anatomy , biochemistry , medicine , biology
Hair cell mechano‐electric transducer (MET) channels play a pivotal role in auditory and vestibular signal detection, yet few data exist regarding their molecular nature. Present work characterizes the MET channel pore, a region whose properties are thought to be intrinsically determined. Two approaches were used. First, the channel was probed with antagonists of candidate channel subtypes including: cyclic nucleotide‐gated channels, transient receptor potential channels and gap‐junctional channels. Eight new antagonists were identified. Most of the effective antagonists had a partially charged amine group predicted to penetrate the channel pore, antagonizing current flow, while the remainder of the molecule prevented further permeation of the compound through the pore. This blocking mechanism was tested using curare to demonstrate the open channel nature of the block and by identifying methylene blue as a permeant channel blocker. The second approach estimated dimensions of the channel pore with simple amine compounds. The narrowest diameter of the pore was calculated as 12.5 ± 0.8 Å and the location of a binding site ∼45% of the way through the membrane electric field was calculated. Channel length was estimated as ∼31 Å and the width of the pore mouth at < 17 Å. Each effective antagonist had a minimal diameter, measured about the penetrating amine, of less than the pore diameter, with a direct correlation between IC 50 and minimal diameter. The IC 50 was also directly related to the length of the amine side chains, further validating the proposed pore blocking mechanism. Data provided by these two approaches support a hypothesis regarding channel permeation and block that incorporates molecular dimensions and ion interactions within the pore.