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Complete Genome Sequence of Peanut stripe virus Isolated in China
Author(s) -
Xu Manlin,
Gao Fangluan,
Yang Jinguang,
Wu Juxiang,
Xie Lianhui,
Chi Yucheng
Publication year - 2014
Publication title -
journal of phytopathology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.53
H-Index - 60
eISSN - 1439-0434
pISSN - 0931-1785
DOI - 10.1111/jph.12248
Subject(s) - biology , cistron , genome , open reading frame , genetics , whole genome sequencing , nucleic acid sequence , nucleotide , peptide sequence , sequence (biology) , phylogenetic tree , gene , virology , microbiology and biotechnology , escherichia coli
Abstract The complete genome sequence of a L aixi isolate of P eanut stripe virus ( PS t V ‐ L aixi) from C hina was determined to be 10, 056 nucleotides in length, excluding the 3′‐terminal poly (A) tail. The viral genome contains a single long open reading frame of 9669 nucleotides encoding a polyprotein of 3222 amino acids. The polyprotein was predicted to be cleaved into ten functional proteins by three viral proteases. An additional protein, termed ‘ PIPO ’, is also found in the P 3 cistron. The complete genome sequence comparison and phylogenetic analysis indicated that PS t V ‐ L aixi was most closely related to three other isolates of PS t V (two from USA and one from T aiwan). To our knowledge, this is the first report of the complete sequence of a PS t V isolate from C hina.