Open AccessGenetic analysis of potential biomarkers and therapeutic targets in ferroptosis from coronary artery disease
Author(s) -
Wu Xun,
Qin Kele,
Iroegbu Chukwuemeka Daniel,
Xiang Kun,
Peng Jun,
Guo Jianjun,
Yang Jinfu,
Fan Chengming
Publication year - 2022
Publication title -
journal of cellular and molecular medicine
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.44
H-Index - 130
eISSN - 1582-4934
pISSN - 1582-1838
DOI - 10.1111/jcmm.17239
Subject(s) - biology , coronary artery disease , disease , gene , immune system , cad , pathogenesis , computational biology , biomarker , mechanism (biology) , bioinformatics , cancer research , genetics , immunology , medicine , biochemistry , philosophy , epistemology
Ferroptosis plays a key role in the death of cells including cardiomyocytes, and it is related to a variety of cardiac diseases. However, the role of ferroptosis‐related genes (FRGs) in coronary artery disease (CAD) is not well characterized. We downloaded CAD‐related information and FRGs from the gene expression omnibus (GEO) database and Ferroptosis Database (FerrDb) respectively. A total of 10 CAD‐related DE‐FRGs were obtained, which were closely linked to autophagy regulation and immune response. Subsequently, CA9 , CBS , CEBPG , HSPB1 , SLC1A4 , STMN1 and TRIB3 among the 10 DE‐FRGs were identified as marker genes by LASSO and SVM‐RFE algorithms, which had tolerable diagnostic capabilities. Subsequent functional enrichment analysis showed that these marker genes may play a corresponding role in CAD by participating in the regulation of immune response, amino acid metabolism, cell cycle and multiple pathways related to the pathogenesis of CAD. Furthermore, a total of 58 drugs targeting 7 marker genes had been obtained. On the contrary, the ceRNA network revealed a complex regulatory relationship based on the marker genes. Also, CIBERSORT analysis showed that the changes in the immune microenvironment of CAD patients may be related to CBS , HSPB1 and CEBPG . We developed a diagnostic potency and provided an insight for exploring the mechanism for CAD. Before clinical application, further research is needed to test its diagnostic value for CAD.