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Preparation of reference stocks suitable for evaluation of alternative NAT ‐based mycoplasma detection methods
Author(s) -
Dabrazhynetskaya A.,
Furtak V.,
Volokhov D.,
Beck B.,
Chizhikov V.
Publication year - 2014
Publication title -
journal of applied microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.889
H-Index - 156
eISSN - 1365-2672
pISSN - 1364-5072
DOI - 10.1111/jam.12352
Subject(s) - nat , chromatography , biology , computational biology , computer science , chemistry , computer network
Aims The aim of this study was to optimize conditions for preparation and cryopreservation of mycoplasma reference materials suitable to evaluate alternative nucleic acid testing ( NAT )‐based assays and to compare their limits of detection ( LOD s) with those of conventional culture‐based methods. Methods and Results A choleplasma laidlawii , M ycoplasma gallisepticum and M ycoplasma arginini stocks with low ratios of genomic copies to colony forming units (12, 8 and 4, respectively) harvested in early stationary phases of growth were preserved with different cryoprotective agents ( CPA s) under slow (1°C min −1 ), moderate (8°C min −1 ), fast (13°C min −1 ) and ‘snapshot’ (60°C min −1 ) cooling rates. Depending on mycoplasma species, increasing the cooling rate from slow to snapshot enhanced cell survival up to 5‐fold. The addition of 10% (v/v) dimethyl sulfoxide ( DMSO ) and 15% (v/v) glycerol significantly improved cell survival of all tested strains. Cryoprotected stocks maintained high and stable titres for at least 1 year during storage at −80°C. Sonication of cell cultures prior to cryopreservation enhanced cell dispersion and reduced of GC / CFU ratios. Conclusions It is feasible to prepare stable reference stocks of cryopreserved mycoplasma cells suitable to reliably compare NAT ‐ and culture‐based mycoplasma testing methods. Significance and Impact of the Study This study describes experimental results demonstrating the preparation and storage of highly viable and dispersed mycoplasma reference stocks suitable for comparing alternative NAT ‐and conventional culture‐based mycoplasma detection methods.