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Genetic diversity and population structure of a cyprinid fish ( Ancherythroculter nigrocauda ) in a highly fragmented river
Author(s) -
Zhai Dongdong,
Zhang Zhi,
Zhang Futie,
Liu Huanzhang,
Cao Wenxuan,
Gao Xin
Publication year - 2019
Publication title -
journal of applied ichthyology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.392
H-Index - 62
eISSN - 1439-0426
pISSN - 0175-8659
DOI - 10.1111/jai.13897
Subject(s) - biology , genetic diversity , tributary , nucleotide diversity , population , ecology , gene flow , genetic divergence , zoology , genetic variation , gene , haplotype , genetics , genotype , geography , demography , sociology , cartography
In this study, samples of Ancherythroculter nigrocauda , an endemic fish in the upper Yangtze River, were collected above and below dams in the Longxi River, a tributary of the upper Yangtze River, China, to investigate the genetic impacts of dams. The mitochondrial cytochrome b gene (cyt b ) and 13 microsatellite (SSR) loci were used to analyze whether dams have resulted in loss of genetic diversity of the two fragmented populations or caused genetic differentiation between them. The results showed that the haplotype diversity (0.488; 0.486), nucleotide diversity (0.084%; 0.082%) and average expected heterozygosity (0.652; 0.676) of the two populations were all at a low level, and recent bottlenecks were detected. However, there was no genetic differentiation detected by the low genetic differentiation index ( F st , cyt b : −0.1677, p = 0.99707; SSR: 0.00259, p = 0.81427). Besides, 11 pairs of half‐sibling relationship were found between the two populations indicating that there were individual movements and gene flow between them. This could be the larvae moving from upstream to downstream when water spilled over dams in flooding season. Therefore, our analysis showed that the dams have caused a loss of genetic diversity of the populations of A. nigrocauda in the Longxi River, blocked the active upstream movement but allowing passive downstream drift of larvae.