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SPECIFIC DETECTION OF AMANITA PHALLOIDES MYCELIUM AND SPORES BY PCR AMPLIFICATION OF THE GPD (GLYCERALDEHYDE‐3‐PHOSPHATE DEHYDROGENASE) GENE FRAGMENT
Author(s) -
KOTŁOWSKI ROMAN,
MYJAK PRZEMYSŁAW,
KUR JÓZEF
Publication year - 2000
Publication title -
journal of food biochemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.507
H-Index - 47
eISSN - 1745-4514
pISSN - 0145-8884
DOI - 10.1111/j.1745-4514.2000.tb00696.x
Subject(s) - biology , amanita phalloides , microbiology and biotechnology , gene , primer (cosmetics) , polymerase chain reaction , intron , genetics , chemistry , botany , organic chemistry
Oligonucleotide primers designed to flank a 635 bp fragment of the gene encoding glyceraldehyde‐3‐phosphate dehydrogenase (gpd) from Araanita muscaria were used to amplify the corresponding gpd fragment from Amanita phalloides. The A. phalloides PCR product was cloned, sequenced and found to be 70 ‐ 77% similar to the known basidiomycetes gpd genes within the exon part and 25 ‐ 52% within the intron part. Based on these data, species‐specific amplification was achieved using a pair of oligonucleotide primers complementary to the A. phalloides gpd intron sequences. These primers allowed the amplification of the corresponding gpd fragment from the A. phalloides but not from various other basidiomycetes, ascomycetes and human matrices. PCR amplification of the A. phalloides DNA gave the predicted PCR product of 284 bp. The created PCR system is an efficient tool for the specific, rapid and sensitive detection of A. phalloides mycelium and spores .