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Rice Mitochondrial Genes Are Transcribed by Multiple Promoters That Are Highly Diverged
Author(s) -
Zhang QunYu,
Liu YaoGuang
Publication year - 2006
Publication title -
journal of integrative plant biology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.734
H-Index - 83
eISSN - 1744-7909
pISSN - 1672-9072
DOI - 10.1111/j.1744-7909.2006.00384.x
Subject(s) - promoter , biology , gene , transcription (linguistics) , genetics , mitochondrial dna , microbiology and biotechnology , oryza sativa , transcription factor , gene expression , linguistics , philosophy
Plant mitochondrial genes are often transcribed into complex sets of mRNA. To characterize the transcription initiation and promoter structure, the transcript termini of four mitochondrial genes, atp1, atp6, cob, rps7 , in rice (Oryza sativa L.), were determined by using a modified circularized RNA reverse transcription‐polymerase chain reaction method. The results revealed that three genes (atp1, atp6, rps7) were transcribed from multiple initiation sites, indicating the presence of multiple promoters. Two transcription termination sites were detected in three genes (atp6, cob, rps7) , respectively. Analysis on the promoter architecture showed that the YRTA (Y=T or C, R=A or G) motifs that are widely present in the mitochondrial promoters of other monocotand dicot plant species were detected only in two of the 12 analyzed promoters. Our data suggest that the promoter sequences in the rice mitochondrial genome are highly diverged in comparison to those in other plants, and the YRTA motif is not an essential element for the promoter activity. (Managing editor: Li‐Hui Zhao)