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Allele frequencies of human leukocyte antigen‐G in a Korean population
Author(s) -
Park Y.,
Park Y.,
Kim Y. S.,
Kwon O. J.,
Kim H.S.
Publication year - 2012
Publication title -
international journal of immunogenetics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.41
H-Index - 47
eISSN - 1744-313X
pISSN - 1744-3121
DOI - 10.1111/j.1744-313x.2011.01053.x
Subject(s) - allele , human leukocyte antigen , genetics , genotyping , linkage disequilibrium , biology , allele frequency , genotype , population , haplotype , exon , hla a , antigen , gene , medicine , environmental health
Summary The human leukocyte antigen (HLA)‐G is a nonclassical major histocompatibility complex class I molecule with relatively limited polymorphism. The differences in allele frequency according to ethnicity and country have not been studied enough, so far. Therefore, fundamental data including allele frequencies and polymorphism are needed for studies on immunological function of HLA‐G in each population. We investigated allele frequencies and 14‐bp polymorphism of the HLA‐G in Koreans. HLA‐G alleles and 14‐bp polymorphisms were determined by sequence‐based typing analysis of exons 2–4 and polymerase chain reaction of exon 8 in 200 unrelated individuals. Genotyping analysis identified eight different HLA‐G alleles, which indicates that the Korean population presents limited HLA‐G allelic polymorphism. HLA‐G*01:01:01:01 and G*01:04:01 were frequent alleles (42.5% and 34.0%), and allelic frequencies were similar to those of other Asian populations. The 14‐bp deletion alleles are higher (78%) in Koreans, although the frequencies of the 14‐bp insertion/deletion polymorphism have been known to be nearly equal in many Caucasian populations. HLA‐G*01:01:08 was reported strong linkage disequilibrium with the 14‐bp deletion in a previous report; the same allele was accompanied with 14‐bp insertion in our study. There are a few studies investigating allele frequencies, and most of them were studied before high‐resolution method era. This is the first study regarding HLA‐G genotypes in Korean, which were identified by high‐resolution method. From this study, we identified HLA‐G frequencies of a Korean population and expect this study could help further investigations for immunological and clinical implications of HLA‐G.