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Molecular cloning and expression of a Relish gene in Chinese mitten crab Eriocheir sinensis
Author(s) -
Li F.,
Wang L.,
Zhang H.,
Zheng P.,
Zhao J.,
Qiu L.,
Zhang Y.,
Song L.
Publication year - 2010
Publication title -
international journal of immunogenetics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.41
H-Index - 47
eISSN - 1744-313X
pISSN - 1744-3121
DOI - 10.1111/j.1744-313x.2010.00954.x
Subject(s) - biology , eriocheir , microbiology and biotechnology , complementary dna , untranslated region , chinese mitten crab , ankyrin repeat , open reading frame , polyadenylation , peptide sequence , rapid amplification of cdna ends , gene , messenger rna , molecular cloning , genetics , zoology
Summary NF‐κB is a B‐cell specific transcription factor that plays crucial roles in inflammation, immunity, apoptosis, development and differentiation. In the present study, a novel NF‐κB‐like transcription factor Relish was cloned from Chinese mitten crab Eriocheir sinensis (designated as EsRelish) by rapid amplification of cDNA ends (RACE) technique based on expressed sequence tag (EST). The full‐length cDNA of EsRelish was of 5034 bp, consisting of a 5′ untranslated region (UTR) of 57 bp, a 3′ UTR of 1335 bp with two mRNA instability motifs (ATTTA), a polyadenylation signal sequence (AATAAA) and a poly (A) tail, and an open reading frame (ORF) of 3645 bp encoding a polypeptide of 1214 amino acids with a calculated molecular mass of 134.8 kDa and a theoretical isoelectric point of 5.26. There were a typical Rel homology domain (RHD), two nuclear localization signal (NLS) sequences (KR), an inhibitor κB (IκB)‐like domain with six ankyrin repeats, a PEST region and a death domain in the deduced amino acid sequence of EsRelish. Conserved domain, higher similarity with other Rel/NF‐κBs and phylogenetic analysis suggested that EsRelish was a member of the NF‐κB family. Quantitative real‐time RT‐PCR was employed to detect the mRNA transcripts of EsRelish in different tissues and its temporal expression in hemocytes of E. sinensis challenged with Pichia methanolica and Listonella anguillarum . The EsRelish mRNA was found to be constitutively expressed in a wide range of tissues. It could be mainly detected in the hemocytes, gonad and hepatopancreas, and less degree in the gill, muscle and heart. The expression level of EsRelish mRNA in hemocytes was up‐regulated from at 3, 6, 9 and 12 h after P. methanolica challenge. In L. anguillarum challenge, it was up‐regulated at 9, 12 and 24 h. The results collectively indicated that EsRelish was potentially involved in the immune response against fungus and bacteria.