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UNRAVELING MOLECULAR DIVERSITY AND PHYLOGENY OF APHANIZOMENON (NOSTOCALES, CYANOBACTERIA) STRAINS ISOLATED FROM CHINA 1
Author(s) -
Wu Zhongxing,
Shi Junqiong,
Lin Shen,
Li Renhui
Publication year - 2010
Publication title -
journal of phycology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.85
H-Index - 127
eISSN - 1529-8817
pISSN - 0022-3646
DOI - 10.1111/j.1529-8817.2010.00869.x
Subject(s) - biology , phylogenetics , cyanobacteria , botany , aphanizomenon , molecular phylogenetics , evolutionary biology , genetic diversity , genetics , gene , bacteria , anabaena , population , demography , sociology
Fifty‐three strains of the genus Aphanizomenon isolated from Chinese waters were employed to conduct morphological examination and sequencing of the 16S rRNA gene, rbcLX (RUBISCO), and cpcBA ‐IGS gene regions. Based on morphological characteristics, the examined strains were divided into three morphotypes [ Aph. flos‐aquae Bréb. ex Bornet et Flahault, Aph. gracile Lemmerm., and Aph. issatchenkoi (Usacer) Proshk.‐Lavr.]. Phylogenetic analysis based on 16S rRNA and rbcLX showed that Aphanizomenon strains could be divided into three main clades (Clade A of Aph. flos‐aquae , Clade B of Aph. gracile , and Clade C of Aph. issatchenkoi ), but two additional clades formed by Aph. ovalisporum and Aph. aphanizomenoides were detected in the 16S rDNA‐based topology. All Aph. issatchenkoi strains contained an additional 175 nucleotides from the 779 to 954 nucleotide location in rbcLX region, compared with strains of Aph. flos‐aquae and Aph. gracile . The cpcBA ‐IGS‐based phylogenetic tree revealed that Aph. issatchenkoi strains were not discriminated from Aph. flos‐aquae strains; however, a concatenated alignment of 16S rDNA, rbcLX , and cpcBA ‐IGS led to the three distinct clades ( Aph. flos‐aquae , Aph. gracile , and Aph. issatchenkoi , respectively). It is suggested that the taxonomic revision of Aphanizomenon and Anabaena genera is required to be performed by employing multilocus sequence analysis and polyphasic studies.