Premium
Difference in drug resistance patterns between minor HIV‐1 populations in cerebrospinal fluid and plasma
Author(s) -
Bergroth T,
Ekici H,
Gisslén M,
Hagberg L,
Sönnerborg A
Publication year - 2009
Publication title -
hiv medicine
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.53
H-Index - 79
eISSN - 1468-1293
pISSN - 1464-2662
DOI - 10.1111/j.1468-1293.2008.00659.x
Subject(s) - viral quasispecies , cerebrospinal fluid , medicine , drug resistance , reverse transcriptase , population , virology , polymerase chain reaction , virus , immunology , gene , genetics , biology , hepatitis c virus , environmental health
Objective The aim of the study was to determine to what extent unique drug resistance patterns appear in minor and major HIV‐1 quasispecies in cerebrospinal fluid (CSF) as compared with blood. Methods Forty‐four plasma and CSF samples from 13 multi‐treatment‐experienced patients, seven of whom provided longitudinal samples, were included in the study. The subjects had failed antiretroviral therapy including lamivudine. The reverse transcriptase (RT) gene was examined by selective real‐time polymerase chain reaction (SPCR), which can detect M184I/V mutants down to 0.2% of the viral population. Results SPCR revealed differences at amino acid position 184 in the plasma/CSF populations in 12 paired samples from eight patients. One plasma sample was positive by SPCR where direct sequencing showed wild‐type M184. The other 11 paired samples showed quantitative differences in the mixed populations of the mutant or wild‐type M184 quasispecies. Differences in other resistance‐associated mutations between plasma and CSF viruses were also found by direct sequencing. Conclusions In multi‐treatment‐experienced patients with therapy failure, differences in drug resistance patterns were found frequently between plasma and CSF in both minor and major viral populations. To what extent this was a true biological phenomenon remains to be established, and the clinical relevance of these findings is yet to be determined.