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Genetic Diversity of Phaeoisariopsis griseola in Kenya as Revealed by AFLP and Group‐specific Primers
Author(s) -
Wagara I. N.,
Mwang'ombe A. W.,
Kimenju J. W.,
Buruchara R. A.,
Jamnadass R.,
Majiwa P. A. O.
Publication year - 2004
Publication title -
journal of phytopathology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.53
H-Index - 60
eISSN - 1439-0434
pISSN - 0931-1785
DOI - 10.1111/j.1439-0434.2004.00836.x
Subject(s) - biology , amplified fragment length polymorphism , genetic diversity , genetics , population , gene pool , genotype , genetic marker , genetic variation , veterinary medicine , botany , gene , medicine , demography , sociology
Genetic diversity of 50 Phaeoisariopsis griseola isolates collected from different agroecological zones in Kenya was studied using group‐specific primers and amplified fragment length polymorphism (AFLP) markers. Group‐specific primers differentiated the isolates into Andean and Mesoamerican groups, corresponding to the two common‐bean gene pools. Significant polymorphisms were observed with all the AFLP primer combinations used, reflecting a wide genetic diversity in the P. griseola population. A total of 207 fingerprints was generated, of which 178 were polymorphic. Cluster analysis of the polymorphic bands also separated the isolates into the two groups defined by group‐specific primers. All the isolates examined were grouped into three virulence populations; Andean, Afro‐Andean and Mesoamerican, and their genetic diversity measured. On average, greater diversity (91%) was detected within populations than between populations (9%). The genetic distance between Andean and Mesoamerican populations was higher ( D = 0.0269) than between Andean and Afro‐Andean ( D = 0.0095). The wide genetic diversity reported here has significant implications in breeding for resistance to angular leaf spot and should be taken into consideration when screening and deploying resistant bean genotypes.