Open AccessThe Superhelical Density of Nuclear DNA from Human Cells
Author(s) -
COOK Peter R.,
BRAZELL A.
Publication year - 1977
Publication title -
european journal of biochemistry
Language(s) - English
Resource type - Journals
eISSN - 1432-1033
pISSN - 0014-2956
DOI - 10.1111/j.1432-1033.1977.tb11420.x
Subject(s) - nucleoid , dna supercoil , dna , lysis , biophysics , base pair , molecule , chemistry , ionic strength , plasmid , helix (gastropod) , microbiology and biotechnology , circular bacterial chromosome , sedimentation coefficient , crystallography , biology , biochemistry , dna replication , escherichia coli , enzyme , gene , ecology , organic chemistry , aqueous solution , snail
Structures resembling nuclei may be released by gently lysing human cells in solutions containing non‐ionic detergents and high concentrations of salt. These structures, which we call nucleoids, sediment in sucrose gradients containing the intercalating agent, actinomycin D, in the manner characteristic of superhelical DNA. We have determined the concentration of actinomycin that minimises the rate of sedimentation of nucleoids. At this concentration, we have determined the amount of drug bound per base pair of DNA by means of a double‐labelling procedure. Assuming that each molecule of actinomycin bound to nucleoid DNA unwinds the double helix by 26°, we calculate that there is one supercoil every 90–180 base pairs in nucleoid DNA. These values lie within the range found for the circular DNA molecules of plasmids and viruses.