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Assessing the impact of various ensilage factors on the fermentation of grass silage using conventional culture and bacterial community analysis techniques
Author(s) -
McEniry J.,
O’Kiely P.,
Clipson N.J.W.,
Forristal P.D.,
Doyle E.M.
Publication year - 2010
Publication title -
journal of applied microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.889
H-Index - 156
eISSN - 1365-2672
pISSN - 1364-5072
DOI - 10.1111/j.1365-2672.2009.04557.x
Subject(s) - silage , dry matter , terminal restriction fragment length polymorphism , fermentation , biology , zoology , population , microbial population biology , food science , composition (language) , organic matter , agronomy , lactic acid , restriction fragment length polymorphism , bacteria , ecology , biochemistry , genotype , linguistics , genetics , demography , philosophy , sociology , gene
Aims: Grass silage is an important ruminant feedstuff on farms during winter. The ensilage of grass involves a natural lactic acid bacterial fermentation under anaerobic conditions, and numerous factors can influence the outcome of preservation. The aim of this study was to investigate the effect of dry matter concentration, ensiling system, compaction and air infiltration on silage bacterial community composition. Methods and Results: The impact of these factors was examined using conventional methods of microbial analysis and culture‐independent Terminal Restriction Fragment Length Polymorphism (T‐RFLP). Silage fermentation was restricted in herbage with a high dry matter concentration, and this was reflected in a shift in the bacterial population present. In contrast, ensiling system had little effect on bacterial community composition. Air infiltration, in the absence of compaction, altered silage bacterial community composition and silage pH. Conclusions: Dry matter concentration and the absence of compaction were the main factors affecting silage microbial community composition, and this was reflected in both the conventional culture‐based and T‐RFLP data. Significance and Impact of the Study: T‐RFLP proved a useful tool to study the factors affecting ensilage. Apart from monitoring the presence or absence of members of the population, shifts in the relative presence of members could be monitored.