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DOGSET : pre‐designed primer sets for fine‐scale mapping and DNA sequence interrogation in the dog
Author(s) -
Wong A. K.,
Neff M. W.
Publication year - 2009
Publication title -
animal genetics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.756
H-Index - 81
eISSN - 1365-2052
pISSN - 0268-9146
DOI - 10.1111/j.1365-2052.2009.01875.x
Subject(s) - primer (cosmetics) , biology , computational biology , sequence (biology) , genome , dna sequencing , genetics , interrogation , reference genome , gene , computer science , history , chemistry , organic chemistry , archaeology
Summary DOGSET is an online resource that provides access to primer sequences that have been computationally mined from the reference genome using heuristic algorithms. The electronic repository includes PCR primers corresponding to 32 135 markers for genetic mapping and 334 657 sequence‐tagged gene elements for targeted re‐sequencing and mutation discovery. A customized report that tailors primer design to wet bench protocols can be exported for a region of interest by specifying genome coordinates in a graphical user interface.