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Inheritance of amplified fragment length polymorphism markers and their utility in population genetic analysis of Plecoglossus altivelis
Author(s) -
Kakehi Y.,
Nakayama K.,
Watanabe K.,
Nishida M.
Publication year - 2005
Publication title -
journal of fish biology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.672
H-Index - 115
eISSN - 1095-8649
pISSN - 0022-1112
DOI - 10.1111/j.0022-1112.2005.00683.x
Subject(s) - biology , amplified fragment length polymorphism , plecoglossus altivelis , genetics , mendelian inheritance , population , microsatellite , genetic marker , evolutionary biology , zoology , genetic diversity , allele , gene , fishery , fish <actinopterygii> , demography , sociology
The reproducibility, mode of inheritance and polymorphism of amplified fragment length polymorphism (AFLP) markers were examined in ayu Plecoglossus altivelis (Salmoniformes: Plecoglossidae). The AFLP markers were highly reproducible, their inheritance following Mendelian expectations. The number of fragments amplified (34–134), polymorphic ratio (0·15–0·78) and average heterozygosity (0·02–0·25) of the AFLP markers showed significant variation among six primer pairs and among ayu populations, including a landlocked Lake‐Biwa population, two amphidromous populations ( P. a. altivelis ) and two Ryukyu‐ayu populations ( P. a. ryukyuensis ). Although AFLP analysis provided similar results in intra‐population diversity and relationships among populations to those found by analyses of allozymes, microsatellites and mitochondrial DNA sequences, AFLPs showed higher polymorphisms and hence greater distinction between genetically close populations.