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An evaluation of the operational model when applied to quantify functional selectivity
Author(s) -
Zhu Xiao,
Finlay David B,
Glass Michelle,
Duffull Stephen B
Publication year - 2018
Publication title -
british journal of pharmacology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.432
H-Index - 211
eISSN - 1476-5381
pISSN - 0007-1188
DOI - 10.1111/bph.14171
Subject(s) - normalization (sociology) , identifiability , computer science , functional selectivity , biological system , data mining , statistics , mathematics , machine learning , agonist , chemistry , receptor , biology , biochemistry , sociology , anthropology
Background and Purpose Functional selectivity describes the ability of ligands to differentially regulate multiple signalling pathways when coupled to a single receptor, and the operational model is commonly used to analyse these data. Here, we assess the mathematical properties of the operational model and evaluate the outcomes of fixing parameters on model performance. Experimental Approach The operational model was evaluated using both a mathematical identifiability analysis and simulation. Key Results Mathematical analysis revealed that the parameters R 0 and K E were not independently identifiable which can be solved by considering their ratio, τ . The ratio parameter, τ , was often imprecisely estimated when only functional assay data were available and generally only the transduction coefficient R ( τ K A) could be estimated precisely. The general operational model (that includes baseline and the Hill coefficient) required either the parameters E m or K A to be fixed. The normalization process largely cancelled out the mean error of the calculated  Δ log  ( R ) caused by fixing these parameters. From this analysis, it was determined that we can avoid the need for a full agonist ligand to be included in an experiment to determine Δ log  ( R ) . Conclusion and Implications This analysis has provided a ready‐to‐use understanding of current methods for quantifying functional selectivity. It showed that current methods are generally tolerant to fixing parameters. A new method was proposed that removes the need for including a high efficacy ligand in any given experiment, which allows application to large‐scale screening to identify compounds with desirable features of functional selectivity.

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