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Assessment of gut microbiota in different developmental stages of Malaysian Mahseer ( Tor tambroides )
Author(s) -
Mohd Nosi Mohamad Zaimin,
Syed Jamil Fadaak Sharifah Noor Emilia,
Muhammad Muhd Danish Daniel,
Iehata Shumpei
Publication year - 2018
Publication title -
aquaculture research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.646
H-Index - 89
eISSN - 1365-2109
pISSN - 1355-557X
DOI - 10.1111/are.13757
Subject(s) - biology , gut flora , juvenile , proteobacteria , zoology , larva , firmicutes , actinobacteria , bacilli , ecology , bacteria , immunology , genetics , 16s ribosomal rna
Malaysian Mahseer ( Tor tambroides ) has a good prospect for aquaculture because of its high market demand. However, there is a scarce information on gut microbiota associated with Malaysian Mahseer unlike other fish species. Therefore, we constructed and compared gut microbiota in different developmental stages (larval, juvenile, fingerling, yearling, and adult) using culture dependent and PCR ‐ DGGE fingerprinting technique for better understanding of gut microbiota composition associated with T. tambroides . Culturable gut microbiota composition in all developmental stages were composed of β‐ and γ‐Proteobacteria, and Bacilli. Biodiversity analysis of culturable gut microbiota showed that larval, juvenile, and adult stages have higher diversity than fingerling and yearling stages. Ward's linkage cluster analysis showed that culturable gut microbiota composition in larval and juvenile stages were close to adult stages, whereas fingerling and yearling stage composed same cluster. PCR ‐ DGGE fingerprinting technique showed that unculturable gut microbiota were constituted by α‐and γ‐Proteobacteria, and Actinobacteria. Ward's linkage cluster analysis showed that unculturable gut microbiota composition in both larval and juvenile stages were distinct from other developmental stages. Our results revealed that gut microbiota composition were varied in different developmental stages of Malaysian Mahseer and continuous shifts of gut microbiota from larval to adult stages.