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Exact B ayesian inference for animal movement in continuous time
Author(s) -
Blackwell Paul G.,
Niu Mu,
Lambert Mark S.,
LaPoint Scott D.
Publication year - 2016
Publication title -
methods in ecology and evolution
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.425
H-Index - 105
ISSN - 2041-210X
DOI - 10.1111/2041-210x.12460
Subject(s) - inference , discretization , statistical inference , computer science , process (computing) , point process , discrete time and continuous time , algorithm , mark and recapture , statistics , data mining , mathematics , artificial intelligence , mathematical analysis , operating system , population , demography , sociology
Summary It is natural to regard most animal movement as a continuous‐time process, generally observed at discrete times. Most existing statistical methods for movement data ignore this; the remainder mostly use discrete‐time approximations, the statistical properties of which have not been widely studied, or are limited to special cases. We aim to facilitate wider use of continuous‐time modelling for realistic problems. We develop novel methodology which allows exact B ayesian statistical analysis for a rich class of movement models with behavioural switching in continuous time, without any need for time discretization error. We represent the times of changes in behaviour as forming a thinned P oisson process, allowing exact simulation and M arkov chain M onte C arlo inference. The methodology applies to data that are regular or irregular in time, with or without missing values. We apply these methods to GPS data from two animals, a fisher ( P ekania [ M artes] pennanti ) and a wild boar ( S us scrofa ), using models with both spatial and temporal heterogeneity. We are able to identify and describe differences in movement behaviour across habitats and over time. Our methods allow exact fitting of realistically complex movement models, incorporating environmental information. They also provide an essential point of reference for evaluating other existing and future approximate methods for continuous‐time inference.