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The genome analysis of C andidatus B urkholderia crenata reveals that secondary metabolism may be a key function of the A rdisia crenata leaf nodule symbiosis
Author(s) -
Carlier Aurelien,
Fehr Linda,
PintoCarbó Marta,
Schäberle Till,
Reher Raphael,
Dessein Steven,
König Gabriele,
Eberl Leo
Publication year - 2016
Publication title -
environmental microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.954
H-Index - 188
eISSN - 1462-2920
pISSN - 1462-2912
DOI - 10.1111/1462-2920.13184
Subject(s) - biology , genome , symbiosis , burkholderia , botany , pseudogene , bacteria , gene , genetics
Summary A majority of A rdisia species harbour B urkholderia sp. bacteria within specialized leaf nodules. The bacteria are transmitted hereditarily and have not yet been cultured outside of their host. Because the plants cannot develop beyond the seedling stage without their symbionts, the symbiosis is considered obligatory. We sequenced for the first time the genome of C andidatus B urkholderia crenata ( C a. B . crenata), the leaf nodule symbiont of A rdisia crenata . The genome of C a. B . crenata is the smallest B urkholderia genome to date. It contains a large amount of insertion sequences and pseudogenes and displays features consistent with reductive genome evolution. The genome does not encode functions commonly associated with plant symbioses such as nitrogen fixation and plant hormone metabolism. However, we identified unique genes with a predicted role in secondary metabolism in the genome of C a . B . crenata. Specifically, we provide evidence that the bacterial symbionts are responsible for the synthesis of compound FR 900359, a cyclic depsipeptide with biomedical properties previously isolated from leaves of A . crenata .