z-logo
Premium
Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
Author(s) -
Sakamoto Mitsuo,
Ikeyama Nao,
Toyoda Atsushi,
Murakami Takumi,
Mori Hiroshi,
Morohoshi Sho,
Kunihiro Tadao,
Iino Takao,
Ohkuma Moriya
Publication year - 2021
Publication title -
microbiology and immunology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.664
H-Index - 70
eISSN - 1348-0421
pISSN - 0385-5600
DOI - 10.1111/1348-0421.12886
Subject(s) - biology , 16s ribosomal rna , subspecies , strain (injury) , ribosomal rna , microbiology and biotechnology , sequence analysis , gene , genetics , zoology , anatomy
An obligately anaerobic, Gram‐stain‐negative, rod‐shaped bacterium, designated strain 2CBH44 T , was isolated from the fecal sample of a healthy Japanese man. This strain was initially assigned as a novel species of the genus Coprobacter based on the 16S rRNA gene sequence similarities compared with other Coprobacter species. The 16S rRNA gene sequence analysis revealed strain 2CBH44 T had relatively low 16S rRNA gene sequence similarity (97.5%) to Coprobacter secundus 177 T . However, strain 2CBH44 T showed 96.9% average nucleotide identity value with C. secundus 177 T , indicating that strain 2CBH44 T and C. secundus 177 T belong to the same species. On the other hand, the digital DNA‐DNA hybridization value between strain 2CBH44 T and C. secundus 177 T was 73.5%, indicating that strain 2CBH44 T is a subspecies of C. secundus . Another anaerobic, Gram‐stain‐variable, rod‐shaped bacterium, designated strain 12CBH8 T , was also isolated from human feces. Strain 12CBH8 T had significantly low 16S rRNA gene sequence similarities (<92.0%) to the validated bacterial species within the family Oscillospiraceae . The percentage of conserved protein values between the genome of strain 12CBH8 T and that of the validated related taxa were <50%, suggesting that strain 12CBH8 T belongs to a novel genus. On the basis of the collected data, strain 2CBH44 T represents a novel subspecies of C. secundus , for which the name Coprobacter secundus subsp. similis subsp. nov. (type strain 2CBH44 T  = JCM 34079 T  = DSM 111570 T ) is proposed. Strain 12CBH8 T represents a novel species of a novel genus, for which the name Solibaculum mannosilyticum gen. nov., sp. nov. (type strain 12CBH8 T  = JCM 34081 T  = DSM 111571 T ) is proposed.

This content is not available in your region!

Continue researching here.

Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom