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Enhancing Brain Source Reconstruction by Initializing 3-D Neural Networks With Physical Inverse Solutions
Author(s) -
Marco Morik,
Ali Hashemi,
Klaus-Robert Muller,
Stefan Haufe,
Shinichi Nakajima
Publication year - 2025
Publication title -
ieee transactions on medical imaging
Language(s) - English
Resource type - Magazines
SCImago Journal Rank - 2.322
H-Index - 224
eISSN - 1558-254X
pISSN - 0278-0062
DOI - 10.1109/tmi.2025.3594724
Subject(s) - bioengineering , computing and processing
Reconstructing brain sources is a fundamental challenge in neuroscience, crucial for understanding brain function and dysfunction. Electroencephalography (EEG) signals have a high temporal resolution. However, identifying the correct spatial location of brain sources from these signals remains difficult due to the ill-posed structure of the problem. Traditional methods predominantly rely on manually crafted priors, missing the flexibility of data-driven learning, while recent deep learning approaches focus on end-to-end learning, typically using the physical information of the forward model only for generating training data. We propose the novel hybrid method 3D-PIUNet for EEG source localization that effectively integrates the strengths of traditional and deep learning techniques. 3D-PIUNet starts from an initial physics-informed estimate by using the pseudo inverse to map from measurements to source space. Secondly, by viewing the brain as a 3D volume, we use a 3D convolutional U-Net to capture spatial dependencies and refine the solution according to the learned data prior. Training the model relies on simulated pseudo-realistic brain source data, covering different source distributions. Trained on this data, our model significantly improves spatial accuracy, demonstrating superior performance over both traditional and end-to-end data-driven methods. Additionally, we validate our findings with real EEG data from a visual task, where 3D-PIUNet successfully identifies the visual cortex and reconstructs the expected temporal behavior, thereby showcasing its practical applicability.

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