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Structure of a GH51 α‐ l ‐arabinofuranosidase from Meripilus giganteus : conserved substrate recognition from bacteria to fungi
Author(s) -
McGregor Nicholas G. S.,
Turkenburg Johan P.,
Mørkeberg Krogh Kristian B. R.,
Nielsen Jens Erik,
Artola Marta,
Stubbs Keith A.,
Overkleeft Herman S.,
Davies Gideon J.
Publication year - 2020
Publication title -
acta crystallographica section d
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 7.374
H-Index - 138
ISSN - 2059-7983
DOI - 10.1107/s205979832001253x
Subject(s) - hydrolase , glycoside hydrolase , arabinoxylan , arabinose , chemistry , biochemistry , enzyme , bacteria , stereochemistry , crystallization , biology , organic chemistry , fermentation , genetics , xylose
α‐ l ‐Arabinofuranosidases from glycoside hydrolase family 51 use a stereochemically retaining hydrolytic mechanism to liberate nonreducing terminal α‐ l ‐arabinofuranose residues from plant polysaccharides such as arabinoxylan and arabinan. To date, more than ten fungal GH51 α‐ l ‐arabinofuranosidases have been functionally characterized, yet no structure of a fungal GH51 enzyme has been solved. In contrast, seven bacterial GH51 enzyme structures, with low sequence similarity to the fungal GH51 enzymes, have been determined. Here, the crystallization and structural characterization of Mg GH51, an industrially relevant GH51 α‐ l ‐arabinofuranosidase cloned from Meripilus giganteus , are reported. Three crystal forms were grown in different crystallization conditions. The unliganded structure was solved using sulfur SAD data collected from a single crystal using the I23 in vacuo diffraction beamline at Diamond Light Source. Crystal soaks with arabinose, 1,4‐dideoxy‐1,4‐imino‐ l ‐arabinitol and two cyclophellitol‐derived arabinose mimics reveal a conserved catalytic site and conformational itinerary between fungal and bacterial GH51 α‐ l ‐arabinofuranosidases.