Premium
Fast analytical evaluation of intermolecular electrostatic interaction energies using the pseudoatom representation of the electron density. II. The Fourier transform method
Author(s) -
Nguyen Daniel,
Volkov Anatoliy
Publication year - 2019
Publication title -
acta crystallographica section a
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.742
H-Index - 83
ISSN - 2053-2733
DOI - 10.1107/s2053273319002535
Subject(s) - multipole expansion , fourier transform , fortran , coulomb , fast fourier transform , computational physics , moment (physics) , function (biology) , algorithm , physics , computer science , electron , quantum mechanics , evolutionary biology , biology , operating system
The Fourier transform method for analytical determination of the two‐center Coulomb integrals needed for evaluation of the electrostatic interaction energies between pseudoatom‐based charge distributions is presented, and its Fortran‐based implementation using the 128‐bit floating‐point arithmetic in the XDPROP module of the XD software is described. In combination with mathematical libraries included in the Lahey/Fujitsu LF64 Linux compiler, the new implementation outperforms the previously reported Löwdin α‐function technique [Nguyen et al. (2018). Acta Cryst. A 74 , 524–536] in terms of precision of the determined individual Coulomb integrals regardless of whether the latter uses the 64‐, 80‐ or 128‐bit precision floating‐point format, all the while being only marginally slower. When the Löwdin α‐function or Fourier transform method is combined with a multipole moment approximation for large interatomic separations (such a hybrid scheme is called the analytical exact potential and multipole moment method, aEP/MM) the resulting electrostatic interaction energies are evaluated with a precision of ≤5 × 10 −5 kJ mol −1 for the current set of benchmark systems composed of H, C, N and O atoms and ranging in size from water–water to dodecapeptide–dodecapeptide dimers. Using a 2012 4.0 GHz AMD FX‐8350 computer processor, the two recommended aEP/MM implementations, the 80‐bit precision Löwdin α‐function and 128‐bit precision Fourier transform methods, evaluate the total electrostatic interaction energy between two 225‐atom monomers of the benchmark dodecapeptide molecule in 6.0 and 7.9 s, respectively, versus 3.1 s for the previously reported 64‐bit Löwdin α‐function approach.