Open AccessInvestigating plant disease outbreaks with long-read metagenomics: sensitive detection and highly resolved phylogenetic reconstruction applied to Xylella fastidiosa
Author(s) -
Marcela A. Johnson,
Haijie Liu,
Elizabeth Bush,
Parul Sharma,
Shu Yang,
Reza Mazloom,
Lenwood S. Heath,
Mizuho Nita,
Song Li,
Boris A. Vinatzer
Publication year - 2022
Publication title -
microbial genomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.476
H-Index - 28
ISSN - 2057-5858
DOI - 10.1099/mgen.0.000822
Subject(s) - xylella fastidiosa , metagenomics , biology , phylogenetic tree , minion , nanopore sequencing , genome , outbreak , clade , subspecies , whole genome sequencing , computational biology , evolutionary biology , genetics , virology , bacteria , gene , ecology