Isolation and characterization of a rare group A rotavirus G13P[18] strain from a diarrhoeic foal in Japan | Zendy

Manabu Nemoto | Zendy; Hidekazu Niwa | Zendy; Hiroshi Kida | Zendy; Tohru Higuchi | Zendy; Yasuhiro Orita | Zendy; Shinsuke Sato | Zendy; Hiroshi Bannai | Zendy; Koji Tsujimura | Zendy; Minoru Ohta | Zendy

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Isolation and characterization of a rare group A rotavirus G13P[18] strain from a diarrhoeic foal in Japan

Author(s) -

Manabu Nemoto,

Hidekazu Niwa,

Hiroshi Kida,

Tohru Higuchi,

Yasuhiro Orita,

Shinsuke Sato,

Hiroshi Bannai,

Koji Tsujimura,

Minoru Ohta

Publication year - 2020

Publication title -

journal of general virology

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.55

H-Index - 167

eISSN - 1465-2099

pISSN - 0022-1317

DOI - 10.1099/jgv.0.001437

Subject(s) - foal , biology , genotype , rotavirus , virology , horse , phylogenetic tree , strain (injury) , isolation (microbiology) , microbiology and biotechnology , group a , virus , virus isolation , veterinary medicine , genetics , gene , medicine , paleontology , anatomy

A rare genotype G13P[18] group A rotavirus (RVA/Horse-tc/JPN/MK9/2019/G13P[18]) was isolated from a diarrhoeic foal for the first time in 28 years. The genotype constellation of the virus was assigned to G13-P[18]-I6-R9-C9-M6-A6-N9-T12-E14-H11 and was the same as that of the first isolated strain, RVA/Horse-tc/GBR/L338/1991/G13P[18]. Phylogenetic analysis suggests that the virus is related to RVA/Horse-tc/GBR/L338/1991/G13P[18] and is distant from typical equine rotaviruses of the G3P[12] and G14P[12] genotypes.

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