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Kushneria phosphatilytica sp. nov., a phosphate-solubilizing bacterium isolated from a solar saltern
Author(s) -
Guangxun Du,
Lingyun Qu,
Xuguang Hong,
Chenghua Li,
Dewen Ding,
Ping Gao,
Qinzeng Xu
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004619
Subject(s) - 16s ribosomal rna , biology , phylogenetic tree , strain (injury) , phosphatidylglycerol , halophile , bacteria , whole genome sequencing , genome size , microbiology and biotechnology , gene , botany , genome , biochemistry , genetics , phospholipid , anatomy , membrane , phosphatidylcholine
A Gram-stain-negative, motile, rod-shaped, non-endospore-forming, aerobic and halophilic bacterium, designated strain YCWA18 T , was isolated from the sediment of Jimo-Daqiao saltern in China. This strain was able to grow at NaCl concentrations in the range 0.5–20 % (w/v) with optimum growth at 6 % (w/v) NaCl. Growth occurred at temperatures of 4–40 °C (optimum 28 °C) and pH 4.0–9.0 (optimum 7.0). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YCWA18 T belonged to the genus Kushneria and shared the highest sequence similarity of 98.7 % with Kushneria sinocarnis DSM 23229 T . Moreover, the phylogenetic analysis based on the 23S rRNA gene sequence also confirmed the phylogenetic position of this novel strain. The predominant fatty acids were C 16 : 0 , C 17 : 0 cyclo and C 12 : 0 3-OH. The major isoprenoid quinone was Q-9 (94.2 %) and the polar lipids were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), an unidentified aminolipid (AL), an unidentified phospholipids (PL) and two unidentified lipids (L). The complete genome of strain YCWA18 T consisted of a single, circular chromosome of 3 624 619 bp, with an average G+C content of 59.1 mol%. A genome-based phylogenetic tree constructed using an up-to-date bacterial core gene set (UBCG) showed that strain YCWA18 T formed a clade with K. sinocarnis DSM 23229 T . However, the level of the ANI and dDDH values between strain YCWA18 T and K. sinocarnis DSM 23229 T were 82.3 and 24.6 %, respectively, which were low enough to distinguish strain YCWA18 T from K. sinocarnis DSM 23229 T . Overall, based on the phenotypic, chemotaxonomic, phylogenetic and genomic analyses, strain YCWA18 T represents a novel species of genus Kushneria . The name Kushneria phosphatilytica sp. nov. is proposed, with the type strain YCWA18 T (=CGMCC 1.9149 T =NCCB 100306 T ).

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